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#

bigdataviewer

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Here are 9 public repositories matching this topic...

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All 9 Java 5 Python 3 JavaScript 1

iGaoWei / BigDataView

Star 5.4k

100+套大数据可视化炫酷大屏Html5模板;包含行业:社区、物业、政务、交通、金融银行等,全网最新、最多,最全、最酷、最炫大数据可视化模板。陆续更新中

bigdata html-template viewmodel echarts bigdataviewer
  • Updated Oct 24, 2025
  • JavaScript

nvladimus / npy2bdv

Star 36

Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.

numpy hdf5 h5 bigdataviewer
  • Updated Oct 27, 2026
  • Python
BigTrace

UU-cellbiology / BigTrace

Star 31

FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets

java imglib2 volume-rendering fiji-plugin 3d-volume utrecht-university bigdataviewer curve-tracing 3d-microscopy
  • Updated Nov 12, 2026
  • Java
bigvolumebrowser

UU-cellbiology / bigvolumebrowser

Star 24

browsing large volumetric data and shapes

java imglib2 point-cloud meshes fiji-plugin 3d-volume utrecht-university bigdataviewer volumetric-rendering 3d-microscopy bigvolumeviewer
  • Updated Oct 15, 2026
  • Java

constantinpape / pybdv

Star 23

python tools for BigDataViewer

3d-viewer bdv bigdataviewer image-pyramid
  • Updated Jul 2, 2026
  • Python
ome-zarr-fiji-java

BioImageTools / ome-zarr-fiji-java

Star 10

Fiji/ImageJ plugin that brings OME-Zarr into everyday Fiji use: drag & drop, clipboard, menu and scripting, in ImageJ or BigDataViewer.

imagej imglib2 fiji bigdataviewer zarr ome-zarr
  • Updated Nov 10, 2026
  • Java

AdaptiveParticles / APR-BigDataViewer

Star 2

Adaptive Particle Representation (APR) viewer based on BigDataViewer (BDV)

viewer mosaic apr adaptiveparticlerepresentation bdv bigdataviewer
  • Updated Mar 1, 2019
  • Java
UnequalTiffs

ekatrukha / UnequalTiffs

Star 2

making montage or combine tiff images of different sizes

java imglib2 scijava fiji-plugin tiff-images utrecht-university bigdataviewer
  • Updated Aug 22, 2025
  • Java

alexandrenpl / montage-blend-and-convert

Star 0

Blends SerialEM montages with IMOD and writes calibrated pyramidal OME-TIFF, plus BigDataViewer-compatible HDF5 and reduced-resolution derivatives for very large montages. GUI and standalone Windows executable.

python hdf5 electron-microscopy microscopy ome-tiff image-conversion imod bioimage-analysis bigdataviewer serialem
  • Updated Sep 21, 2026
  • Python

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