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(moved to https://github.com/sagemathinc/cocalc-ai) CoCalc: Collaborative Calculation in the Cloud
nodejs python coffeescript markdown cloud r terminal latex jupyter julia postgresql jupyter-notebook mathematics mathjax octave gap sagemath pari
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
python bioinformatics pipeline genomics assembly docker-image polymorphic gap closing fasta scaffolding assembled-contigs genome-assembly paired-end contigs heterozygous mate-pairs
General purpose mathematical software system, compatible fork of https://github.com/sagemath/sage supporting modularized installation with pip. Main repository, containing Sage library (src/), modularized pip-installable packages (pkgs/), Sage distribution (build/). Source repo for most packages in https://pypi.org/org/passagemath/
python geometry optimization graphs linear-algebra linear-programming mathematics sage cas gap flint graph-theory combinatorics computer-algebra-system singular sagemath macaulay2 digraphs pari-gp polymake
The human-friendly Rubik's Cube computer (WIP)
Code for running Petroleum Experts OpenServer API commands in Python
The GAP package Digraphs
GapFlyt: Active Vision Based Minimalist Structure-less Gap Detection For Quadrotor Flight
robot deep-learning drone neural-network robotics detection nvidia perception gap autonomous minimalist bee quadrotor parrot-bebop bio-inspired prg unmanned-aerial-vehicle nvidia-tx2 gapflyt active-vision
The GAP package Semigroups
enumeration gap monoids orb semigroups greens-relations congruences maximal-subsemigroups finitely-presented-semigroups digraphs
Logarithmic Reinforcement Learning
algorithm reinforcement-learning algorithms dqn gap rl discount discount-factor log-rl logrl action-gap
PyFluxPro V3.4 is a significant upgrade from previous versions. It has several new features, improved stability and is introduced ahead of the 2021 OzFlux Data Workshop.
This highly visual and responsive VB6 application is an implementation of the global sequence alignment algorithm. It allows the modification of the alignment parameters (match, mismatch, gap), and it shows the pairwise alignment as well as the score matrix in real time.
visualization mismatch genomics genetics heatmap matrix match dna global gap rna proteomics traceback score dna-sequences sequence-alignment
Deposited packages of the homalg project
Run any AI agent — Claude Code, GAP, LangGraph DeepAgents — in a hermetic sandbox. Reference implementation of the Harness Protocol.
typescript sandbox gap agents harness ai-agents bwrap agent-framework anthropic langgraph claude-code agent-runtime deepagents claude-agent-sdk gitagent
k-means clustering implementation for Excel VBA
Divisive Intelligent K-Means algorithm (DiviK) for joint feature selection and clustering of heavily multidimensional data.
machine-learning clustering feature-selection gap feature-engineering auto-ml single-cell-rna-seq mass-spectrometry-imaging omics-analysis divik unsupervised-auto-ml auto-clustering divisive-intelligent-kmeans dunn
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